Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACTGCGGCAGAGCAAT
((((.(((((((((.......&)))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182620
GeneSymbolSKA2
Binding site346,363
Score0.846
Seed0
Au0.603
Energy-17.2
Binding len17
Me-9.025
Phylopstem0.2177594444444445
Phylopflank1.0982803512500001
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end1
PositionCDS
2D Structure