Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGAAAGTGTCGGCTAAGCACACCAGCCTGCGGCGGCAGCTGCAGC
((((((((((.(((((.((((&.))))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182628
GeneSymbolCFAP100
Binding site403,451
Score1.0
Seed1
Au0.324
Energy-30.4
Binding len22
Me-6.762
Phylopstem3.06765015
Phylopflank3.5998568774999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure