Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTAGATGGGTCCCCAAGGAGGCCCTGACTGGGCTGGTC
.((((((((((.(((((((((.&))))))))).))).....................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182632
GeneSymbolSLC6A18
Binding site1399,1441
Score0.846
Seed1
Au0.338
Energy-22.8
Binding len42
Me-7.14
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure