Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGTGGACCTACAGCCGCCTGCGGG
((((((..((((((((.((((&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182639
GeneSymbolHPS1
Binding site694,724
Score0.923
Seed0
Au0.324
Energy-24.4
Binding len20
Me-7.795
Phylopstem0.3347826025000001
Phylopflank-0.03094966475000002
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure