Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATAGCTAGCTGCGAG
((((((((((.(((((.....&))))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182639
GeneSymbolHPS1
Binding site1207,1225
Score0.923
Seed1
Au0.441
Energy-19.3
Binding len18
Me-6.762
Phylopstem-0.21477568181818177
Phylopflank0.16108682625000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure