Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCCCGGAAGCAAGGCCTCTGGAAAACCGCGGCCCCTGAGTTGCAAA
((((((((((((((...((((&.))))......)))))))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182640
GeneSymbolMRPS9
Binding site91,142
Score0.923
Seed1
Au0.5
Energy-21.8
Binding len34
Me-4.906
Phylopstem0.30137666363636356
Phylopflank-0.14118574375
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure