Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGAGCTCTGCAGCTGCAGC
((((((((((((..((..(((&)))....)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350338
GeneSymbolCFAP298-TCP10L
Binding site931,954
Score0.846
Seed1
Au0.426
Energy-22.3
Binding len23
Me-6.084
Phylopstem-0.13569850000000003
Phylopflank0.05478583749999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure