Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCCCAGGCCGCCATGCTGCAGG
(((((((.(((((((..((((&))))..))).))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350338
GeneSymbolCFAP298-TCP10L
Binding site1814,1839
Score0.846
Seed1
Au0.353
Energy-21.4
Binding len25
Me-6.484
Phylopstem-0.075244125
Phylopflank0.031212100000000034
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure