Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGAAGCAGCTGACATGCTGGTGGACGGCCGTGACTGGAGCCCGTGC
(((.(((((((((((((((((.&)))))))))))..............................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182647
GeneSymbolOPRL1
Binding site1841,1893
Score0.846
Seed0
Au0.338
Energy-25.8
Binding len52
Me-6.97
Phylopstem-0.22930692340425532
Phylopflank-0.12950823875
Longest consecutive pairings11
Position of longest consecutive pairings41
Pairings in 3prime end7
Position3UTR
2D Structure