Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCCAGCCGCACCTCTGAAGGTTTTCTGTGTGCTGCAC
.((((((((((((((..(((.&)))....))))))))....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182647
GeneSymbolOPRL1
Binding site2264,2306
Score0.846
Seed1
Au0.382
Energy-22.5
Binding len42
Me-4.026
Phylopstem-0.0316431970588235
Phylopflank-0.02536206375000001
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure