Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCCTGTGACGTCTCCTCAGGGCAGCTGGAC
.(.((((((((((((.(((((&))))))))))..................))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182647
GeneSymbolOPRL1
Binding site2044,2082
Score0.923
Seed0
Au0.353
Energy-22.6
Binding len38
Me-5.584
Phylopstem0.3494769766666666
Phylopflank0.14733657624999996
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure