Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCGGTCTGAGGGCTTCGACACCTACCGCTGCGACCGCAACCTGG
...(((.((((((((((.(((&.)))..))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182649
GeneSymbolPCNA
Binding site312,359
Score0.846
Seed0
Au0.368
Energy-21.4
Binding len22
Me-8.058
Phylopstem3.3272142000000002
Phylopflank2.0091439373749997
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure