Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCT
....(((((((((((((((((.&))))))).....................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182664
GeneSymbolRASSF5
Binding site2223,2262
Score0.923
Seed0
Au0.456
Energy-26.4
Binding len39
Me-9.547
Phylopstem-0.36194670000000007
Phylopflank0.10531458500000009
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure