Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGCACTGCGCTCGGAGAGCCGGTGG
(((((((((...(((((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182664
GeneSymbolRASSF5
Binding site2309,2338
Score0.923
Seed1
Au0.265
Energy-24.8
Binding len18
Me-11.352
Phylopstem-0.2821022666666667
Phylopflank0.18727019887500007
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure