Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGCCGCCGCTGCC
..(((((.((((((....(((&)))..)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182664
GeneSymbolRASSF5
Binding site31,49
Score0.923
Seed0
Au0.294
Energy-21.8
Binding len18
Me-8.239
Phylopstem-0.24619683333333334
Phylopflank0.5540351317307692
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end4
Position5UTR
2D Structure