Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCT
....(((((((((((((((((.&))))))).....................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182665
GeneSymbolRASSF5
Binding site2218,2257
Score0.923
Seed0
Au0.456
Energy-26.4
Binding len39
Me-9.547
Phylopstem0.3624818265789475
Phylopflank-0.03269321962499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure