Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGAGCTGGAAGGGGCCACGTGG
(((((((((((((((.(((...&))).))...)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182685
GeneSymbolEFNA1
Binding site973,997
Score0.923
Seed1
Au0.412
Energy-23.7
Binding len24
Me-4.171
Phylopstem-0.470200757894737
Phylopflank-0.32059134375
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure