Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCGGCCCTGCC
..(((((((((((((......&))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182687
GeneSymbolPKMYT1
Binding site188,204
Score0.846
Seed1
Au0.353
Energy-20.7
Binding len16
Me-5.19
Phylopstem2.6574744000000003
Phylopflank3.2820108149999996
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure