Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCAGAGTGGAAGAGGGCGGAGGCTAATCCAAGAGACCTTGGGGCCAGCTGG
(((((((((((((((((((...&.))))).))))....)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182699
GeneSymbolDDX53
Binding site110,164
Score0.923
Seed1
Au0.353
Energy-22.8
Binding len27
Me-3.938
Phylopstem3.7149950799999996
Phylopflank3.2138676724999997
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure