Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTCTCAAG
(((..((((((((((((((((&.))))....))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182709
GeneSymbolKAT5
Binding site641,682
Score0.923
Seed0
Au0.485
Energy-22.0
Binding len27
Me-11.089
Phylopstem2.08495055
Phylopflank3.4212607000000004
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure