Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTGGAAAGGCATCAGTTG&AGCTGTTTGCCTTCCAAAGTGT
(((((((.((((((.(((((.&)))))..)))))))))).))).
Details
MiRNAhsa-miR-890
RefseqIDNM_182715
GeneSymbolSYPL1
Binding site1094,1116
Score0.808
Seed1
Au0.662
Energy-19.5
Binding len22
Me-6.987
Phylopstem3.368343875
Phylopflank4.9056430225000005
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure