Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTGGGATCGCATTGCAT
.(((((.(((((((.((((((&))))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182724
GeneSymbolCREM
Binding site1229,1251
Score1.0
Seed0
Au0.559
Energy-19.4
Binding len22
Me-6.072
Phylopstem2.1149985714285715
Phylopflank2.052113186375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure