Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCGGAGTGAGGATGCCAGGTC
(((((((((...((...((...&))...))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182746
GeneSymbolMCM4
Binding site159,180
Score0.846
Seed1
Au0.338
Energy-16.0
Binding len21
Me-12.32
Phylopstem0.9291101999999998
Phylopflank1.0600736610000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure