Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGGTGGAGATGGACCGCGGCCGCAT
.(((.(((((((((.......&.))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182746
GeneSymbolMCM4
Binding site1024,1053
Score0.923
Seed0
Au0.279
Energy-21.0
Binding len15
Me-8.881
Phylopstem-0.1801685333333333
Phylopflank-0.02688827375
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end1
PositionCDS
2D Structure