Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAAACTGCAGTCTCTGCAGG
(((((((((((((((((....&))))).))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350474
GeneSymbolRIMS1
Binding site4335,4357
Score0.846
Seed1
Au0.574
Energy-19.6
Binding len22
Me-3.938
Phylopstem1.5885080380952379
Phylopflank2.3405808525
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure