Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTTGTGCAGAGATGCTGGGA
.((((((((((((.((((....&)))).))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182755
GeneSymbolZNF438
Binding site2697,2721
Score0.846
Seed1
Au0.456
Energy-16.5
Binding len24
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure