Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAATATTCAACAGGCAGTTGCAGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182760
GeneSymbolSUMF1
Binding site525,555
Score1.0
Seed1
Au0.5
Energy-22.1
Binding len16
Me-4.957
Phylopstem0.7335041428571428
Phylopflank1.62245376875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure