Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAATCGAGACTGCAAT
((((((((.(((((((((...&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182772
GeneSymbolCREM
Binding site1854,1873
Score0.827
Seed1
Au0.647
Energy-19.9
Binding len19
Me-4.994
Phylopstem-0.6315937111111112
Phylopflank-0.063817928
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure