Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGGAGAGCCGAGTTGCAGT
((((((((.(((((.(..((.&))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182772
GeneSymbolCREM
Binding site687,707
Score0.846
Seed1
Au0.574
Energy-19.7
Binding len20
Me-5.729
Phylopstem4.2901511
Phylopflank4.255584825
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure