Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCTGGGG
.(((((((((((..........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182791
GeneSymbolCCDC33
Binding site2039,2051
Score0.846
Seed1
Au0.382
Energy-17.2
Binding len12
Me-6.908
Phylopstem3.448307709090909
Phylopflank3.3130735299999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure