Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTAGCAAAGGAAGCAGCTGCT
..((((((((..((((.((((&)))).)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182796
GeneSymbolMAT2B
Binding site653,676
Score0.885
Seed1
Au0.544
Energy-18.5
Binding len23
Me-11.129
Phylopstem4.265198750000001
Phylopflank4.374516691249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure