Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACGGGCTGCTGCAGCTGA
...(((((((((((((..(((&)))..)))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182798
GeneSymbolEGFLAM
Binding site1078,1101
Score0.923
Seed0
Au0.412
Energy-20.1
Binding len23
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure