Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGAGATCCCGCAGTTTATCGGCCGCAGTTA
....(((((((((((((((.(&.).)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182801
GeneSymbolEGFLAM
Binding site168,203
Score0.923
Seed0
Au0.515
Energy-18.7
Binding len20
Me-9.547
Phylopstem1.554311125
Phylopflank1.4972732675
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure