Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACGATCCTCCTGGAGAGAAGATGGTAGCAGCAAA
((((.((((((((((((((((&))))))))))).................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182810
GeneSymbolATF4
Binding site1058,1097
Score0.923
Seed0
Au0.544
Energy-22.3
Binding len39
Me-8.057
Phylopstem3.874587272727274
Phylopflank4.3925746000000006
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure