Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCCTTCTTCCCTGCCAGGTG
((((((((.........(((((&))))).........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001350483
GeneSymbolCAP1
Binding site2262,2285
Score0.846
Seed1
Au0.456
Energy-16.0
Binding len23
Me-15.523
Phylopstem0.6902864750000001
Phylopflank0.59567308875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure