Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGCTCCTGGTGGCCGTGGCTGTGT
..(((((((((((((..(((.&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182826
GeneSymbolSCARA3
Binding site488,513
Score0.846
Seed1
Au0.412
Energy-23.1
Binding len20
Me-5.19
Phylopstem6.494392307692308
Phylopflank4.01374884125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure