Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCATTACCGCTCCTGTCTCTTGCCCCAGCTGCAC
.((((((((.((..((((((.&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182836
GeneSymbolRABGGTA
Binding site703,741
Score0.846
Seed1
Au0.338
Energy-21.7
Binding len18
Me-7.182
Phylopstem-0.0671811
Phylopflank-0.625482342125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure