Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGTTGAAGATGAAATCCACTGAGGAGGGAAGTCCAGCACCCTGTGTGCCAGTC
.((((((((((((((.(((.((&.)).))).)))))))).................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182852
GeneSymbolCCNB1IP1
Binding site23,78
Score0.846
Seed1
Au0.397
Energy-22.4
Binding len40
Me-4.026
Phylopstem0.02885296774193549
Phylopflank0.32151997880952377
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end6
Position5UTR
2D Structure