Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAATGAAGGGGCATCTGG
((...((((((((((((((...&))))))))...))))))...)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182854
GeneSymbolSNX20
Binding site2363,2386
Score0.846
Seed0
Au0.471
Energy-22.4
Binding len23
Me-12.646
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure