Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGTCCACCGCAGCTGGAGG
((.((((((((((........&.)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182894
GeneSymbolVSX2
Binding site1165,1188
Score0.923
Seed0
Au0.353
Energy-21.4
Binding len15
Me-7.32
Phylopstem-0.7929115000000001
Phylopflank-0.30448252750000004
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end0
PositionCDS
2D Structure