Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTGGGGCCGCAGCTGCAAC
((((((((((((((.((.(((&)))..)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182895
GeneSymbolSCARF2
Binding site684,707
Score0.846
Seed1
Au0.324
Energy-29.4
Binding len23
Me-4.673
Phylopstem7.483823671428573
Phylopflank5.978044337500001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure