Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGACTGAAGTGCAGTGG
((((((((.(..(((((((((.&)))))))))..).))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182899
GeneSymbolCREB5
Binding site2935,2958
Score0.846
Seed1
Au0.456
Energy-23.4
Binding len23
Me-11.166
Phylopstem2.1246965233333333
Phylopflank1.5586707127500001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure