Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACGACCCCACCTTCCCCACCAGGCGGCTGG
...(((((((((((((.((((&))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350494
GeneSymbolNT5DC4
Binding site228,262
Score0.846
Seed0
Au0.397
Energy-21.4
Binding len34
Me-6.515
Phylopstem2.0902221034482755
Phylopflank1.77961560875
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure