Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCTGGTACACACGGGAGAAAAGCCACATGAATGCCAGGTC
(((((((((.(.((((......&.))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182907
GeneSymbolPRDM1
Binding site1605,1648
Score0.846
Seed1
Au0.485
Energy-17.9
Binding len17
Me-8.527
Phylopstem-0.06967696666666666
Phylopflank-0.35005308749999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure