Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATTCCAGAGGGGAGCTT
....((((((((((((((((((&))))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182907
GeneSymbolPRDM1
Binding site155,175
Score0.846
Seed0
Au0.603
Energy-26.7
Binding len20
Me-9.547
Phylopstem-0.45130446315789463
Phylopflank-0.08535473000000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure