Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAAGGAAAGCTGCAGA
((((((((....(((((((((&)))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182910
GeneSymbolSYNE2
Binding site182,204
Score0.923
Seed1
Au0.603
Energy-22.4
Binding len22
Me-12.408
Phylopstem5.4822944444444435
Phylopflank2.12615157875
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position5UTR
2D Structure