Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCTTAATCGACAGCTGG
...((((((((((((..((((&))))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182911
GeneSymbolTSGA10
Binding site2328,2348
Score0.846
Seed0
Au0.632
Energy-17.7
Binding len20
Me-6.748
Phylopstem3.1693644615384615
Phylopflank2.8595135312499997
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure