Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCCACAGCCGGGGATTGCT
..((((((.(((((((..(((&.)))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182920
GeneSymbolADAMTS9
Binding site5908,5933
Score1.0
Seed1
Au0.382
Energy-20.7
Binding len20
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure