Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGGAATCCAGCAGCAGCACAGCAGTGCAGCCGCGGCTGCC
..(((((((((((((((..((&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182923
GeneSymbolKLC1
Binding site848,891
Score1.0
Seed1
Au0.279
Energy-30.8
Binding len21
Me-4.957
Phylopstem0.9117014666666667
Phylopflank1.4078976537500003
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure