Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAAGGCGGCCGCACCTGGGAGGGGAGCTTGGTGGCCCCCGTGGCTGCAAG
((((((((((((((((..(((&)))....))))))))).............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182932
GeneSymbolSLC8A3
Binding site3258,3311
Score0.923
Seed1
Au0.353
Energy-24.7
Binding len53
Me-3.938
Phylopstem3.45246104
Phylopflank3.15062642
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure